Transcript Writing a Research Paper - Florida State University

Find Full Text Journal Articles
Using Pubmed
Nancy B. Clark, M.Ed.
Director of Medical Informatics Education
FSU College of Medicine
All recourses are available online in Medical
Summer 2011
Informatics site under Topics: Research
1
Session Objectives
Attendees will be able to
Use Pubmed to search the medical journals
Find full text peer-reviewed journal articles
Summer 2011
2
Tutorials Available
Tutorials at Pubmed
Searching PubMed
Using Mesh Terms
Using My NCBI
Summer 2011
3
Log Into EZProxy
If off campus
Before you start searching
Summer 2012
4
What is MEDLINE?
produced by the National Library of Medicine
electronic version of Index Medicus, International
Nursing Index, International Dental Literature
1966 – present
4,000+ international biomedical journals
includes journal articles, reviews, letters, editorials,
comments, some conference proceedings and books
Summer 2012
5
MEDLINE Fields
Author
Title
Date
Type of publication
Journal, Volume, Issue
Page numbers
Abstract
Institution
MeSH Headings
A lot of cataloging
numbers
Summer 2012
6
Where is MEDLINE?
Pubmed (NLM)
Google Scholar
MDConsult
Medscape
Links to
Full text journal
articles
Books
EBM databases
Summer 2012
7
Getting To PubMed From Library
1. Use Search Engines PubMed Box or
2. Use MedResources List or Map
3. Type PubMed into Online Resources search
ID is built into links
Summer 2012
8
PubMed MEDLINE
Entering PubMed
Type search terms
Tutorials
Save searches
in NCBI
Summer 2012
9
Why get NCBI Account?
Save searches
Save citations in My Bibliography
Automatically update and e-mail search results
from your saved searches
Filter search results
Highlighting search terms
Summer 2012
10
Summer 2012
11
PubMed MEDLINE
Preliminary Results
Large number of hits.
Scroll down to ‘Details’ to show how PubMed
translated the search. (You can modify the search by
typing in the text box.) Summer 2012
12
Boolean Operators
AND
OR
NOT
Parenthesis
*
quotes
“medication errors” AND
“quality improvement” NOT
(ambulatory OR “nursing
home”)
Summer 2012
13
PubMed MEDLINE
Limit Results
Click on ‘Limits’
Limit by
• Pub Date
• Subjects
• Type journal
• Type research
• Language
• …
Warning: Limits
all searches until
removed
Summer 2012
14
Types of Articles
Editorials
Letters
Review Articles
Meta-Analysis
Original Research
 Case Studies
 Case Control
 Time Series
 Cross sectional
 Cohort
 Control trials
 Randomized Control
Trials
 Systematic reviews
Clinical Guidelines
Summer 2012
15
PubMed MEDLINE
Refined Results
Number of hits is still
quite large. (384 from
previous 22,441)
Add ‘cancer
ethics’ to the
search terms.
Summer 2012
16
PubMed MEDLINE
Combining Searches
Multiple Terms:
Use Advanced
Search
History
#2 AND #3
Click on number
of hits to see
results
Summer 2012
17
Getting the articles
Display Settings:
Select ‘Abstract’
view and click on
‘Apply’
Click on FSU icon
to link to full text.
Summer 2012
18
Click on Article Title: Abstract View
Link to full text FSU subscriptions
Related Citations
Summer 2012
19
MeSH Terms
Use MeSH terms to find
Summer 2012
search
terms.
20
Summer 2012
21
When there is no FSU Button…
Summer 2012
22
Identify the Full Journal Title
Summer 2012
23
Finding Full Text Articles
Pubmed Linked to full text? No…
1. Medical E-Journals list from library
webpage? Not listed…
2. FSU E-Journals from library webpage.
In electronic format? No...
3. Interlibrary loans for titles not owned
by FSU: [email protected]
Summer 2012
24
Medical E-Journals
In electronic less
than 12~ years
Each journal
different
Digitizing old
issues slowly
Summer 2012
25
PubMed MEDLINE
Getting the articles when there is no FSU icon
If there is no FSU icon, there are
other options:
1. Search E-Journal Titles for the
journal name
Summer 2012
26
All FSU E-Journals
Under Resources
Expand E-Journals
Click on
All FSU E-Journals
Summer 2012
27
FSU Libraries E-Journals
Summer 2012
28
FSU E-Journals
Consultant Pharmacist only up to 2000
Summer 2012
29
Interlibrary Loan
Interlibrary Loan:
1. Sign into EZProxy
2. Fill out form
3. Copy and Paste info from
PubMed Citation into Section 2
Summer 20124. Get PMID #
30
Finding Journal Articles at FSU
DOOR 1
Direct Link to
full-text
article.
JOURNAL ARTICLES
DOOR 2
Locate the
e-journal
with Medical Library
E-Journals list.
DOOR 3
Locate the e-journal
with Serials Solutions
Interlibrary
INTER-LIBRARY
LOAN
[email protected]
.edu
Loan
Summer 2012
31
Interesting New Tool: knalij.com
Use Chrome Browser (FireFox second choice)
Open Library site and open Pubmed
In another tab, open knalij.com
Types of Searches
Journal Cluster Map (default)
Co-author Map
Impact of funding Map
Summer 2012
32