Transcript Slide 1
Protein: Amino Acids
Chapter 6
Amino Acids
Atoms in All Amino Acids
Carbon, hydrogen, oxygen + nitrogen
Amino Acid Structure
Central Carbon with 4 spaces
1. Hydrogen
2. Amino group
3. Acid group
4. Unique side group or side chain
Amino Acid
Side group
varies
Amino
group
Acid
group
Identical except for Side Group
Glycine
Alanine
Aspartic acid
Phenylalanine
The Essential Amino Acids
Isoleucine (Ile) - for muscle production, maintenance and
recovery after workout. Involved in hemoglobin formation, blood
sugar levels, blood clot formation and energy.
Leucine (Leu) - growth hormone production, tissue production
and repair, prevents muscle wasting, used in treating conditions
such as Parkinson’s disease.
Lysine (Lys) - calcium absorption, bone development, nitrogen
maintenance, tissue repair, hormone production, antibody
production.
Methionine (Met) - fat emulsification, digestion, antioxidant
(cancer prevention), arterial plaque prevention (heart health), and
heavy metal removal.
The Essential Amino Acids
Phenylalanine (Phe) - tyrosine synthesis and the
neurochemicals dopamine and norepinephrine. Supports
learning and memory, brain processes and mood elevation.
Threonine (Thr) monitors bodily proteins for maintaining or
recycling processes.
Tryptophan (Trp) - niacin production, serotonin production,
pain management, sleep and mood regulation.
Valine (Val) helps muscle production, recovery, energy,
endurance; balances nitrogen levels; used in treatment of
alcohol related brain damage.
Histidine (His) - the 'growth amino' essential for young
children. Lack of histidine is associated with impaired speech
and growth. Abundant in spirulina, seaweed, sesame, soy, rice
and legumes.
The Chemist’s View of Proteins
More complex than starches- a glucose chain
Or fats- carbon chains attached to glycerol
Twenty amino acids like an alphabet
Different characteristics
Essential amino acids- must come from food
Nonessential amino acids- body can make
Conditionally essential- When body cannot
make nonessential, then it has to be in diet.
Ex: phenylketonuria
Protein Made from Amino Acids
Proteins (like words)
Peptide bonds link amino acids (the letters)
Condensation reactions
Amino acid sequencing
Primary structure – chemical bonds
Secondary structure – electrical attractions
Tertiary structure – hydrophilic & hydrophobic
Quaternary structure – two or more
polypeptides
Amino Acid Chains
Amino acid chains are linked by peptide
bonds in condensation reactions.
a. Dipeptides have two amino acids
bonded together.
b. Tripeptides have three amino acids
bonded together.
c. Polypeptides have more than two amino
acids bonded together.
Condensation Rxn to Dipeptide
Four Levels of Structure
Primary structure: amino acid sequence
Secondary structure: weak electrical
attractions within a polypeptide chain (shape)
The shape of a protein provides stability.
Tertiary structure: polypeptide tangles
Hydrophilic and hydrophobic side groups
attraction and repulsion
Four Levels of Structure
Quaternary Structures
Multiple polypeptide interactions
Some polypeptides function
independently.
Some polypeptides need to combine with
other polypeptides to function correctly.
An example of a quaternary structure is
hemoglobin, which is composed of 4
polypeptide chains.
The Chemist’s View of
Proteins
Protein
Denaturation
Disruption of
stability
Uncoil and lose
shape
Stomach acid
Heat (cooking)
Four highly folded polypeptide chains
form the globular hemoglobin protein.
Iron
Heme, the
nonprotein
portion of
hemoglobin,
holds iron.
The amino acid sequence
determines the shape of the
polypeptide chain.
Insulin is Curly
(Sulfur Bonds)
Protein Digestion
Mouth chews it up
Stomach
Hydrochloric acid denatures proteins
Pepsinogen converted to pepsin by HCl
Small intestine
Hydrolysis: Proteases hydrolyze protein into
short peptide chains called oligopeptides,
which contain four to nine amino acids.
Peptidases split proteins into amino acids.
[Animation 0606]
Protein Absorption
Used by intestinal cells for energy or
synthesis of necessary compounds.
Amino acids are transported to the liver via
capillaries
Protein Digestion
Protein Absorption
Transport into intestinal cells
Uses of amino acids by intestinal cells
Unused amino acids transported to liver
Enzyme pepsin is digested in higher pH of SI
Predigested proteins unbeneficial for healthy
people
Protein Synthesis
Protein is constantly being broken down and
synthesized in the body by unique genetic
information of each person
Amino acid sequences of proteins
genes in DNA in cell nuclei
Diet
Adequate protein
Essential amino acids
Animation 0607
Protein Synthesis
DNA template to make mRNA
Transcription
mRNA carries code to ribosome
Ribosomes are protein factories
mRNA specifies sequence of amino acids
Translation
tRNA
Sequencing errors
Protein Sequencing Error
Protein Synthesis
Gene expression and protein synthesis
Capability of body cells
Protein needs met by cell-regulated gene
expression
Dietary influence on gene expression
PUFA influences gene expression for
lipases, hence development of CHD
Two of Protein’s Roles
Growth and maintenance
Building blocks for most body structures
Collagen matrix for bones
Replacement of dead or damaged cells
Enzymes catalyze
Breakdown rxns (catabolism)
Building up rxns (anabolism)
Enzyme Action of Proteins
B
A
A
B
New
compound
A B
Enzyme
The separate compounds,
A and B, are attracted to
the enzyme’s active site,
making a reaction likely.
Enzyme
The enzyme forms a
complex with A and B.
Enzyme
The enzyme is
unchanged, but A and B
have formed a new
compound, AB.
Stepped Art
Roles of Proteins
Hormones regulate processes
Messenger molecules
Transported in blood to target tissues
Regulators of fluid balance
Edema- classic imbalance
Acid-base regulators
Attract hydrogen ions
Transporters – specificity
Regulators of Fluid Balance
Plasma proteins can leak out of the
blood into the tissues and attract water,
causing swelling (edema).
In critical illness and inflammation
Inadequate protein synthesis caused
by liver disease
Inadequate dietary protein intake
Fluid Imbalance
Acid-Base Regulators
Act as buffers by keeping solutions acidic or
alkaline.
Acids release hydrogen ions in a solution.
Bases accept hydrogen ions in a solution.
Acidosis- high levels of acid in blood and body
fluids.
Alkalosis- high levels of alkalinity in blood and
body fluids.
Transporters
Carry lipids, vitamins, minerals and
oxygen in the body.
Ex: Heme Fe captured from SI by a
protein then attached to globin. Hemoglobin carries O2 from lungs to cells.
Act as pumps in cell membranes,
transferring compounds from one side of
the cell membrane to the other.
Transport Proteins
Animation 0610
Antibodies
Fight antigens- bacteria and viruses
Provide immunity to fight an antigen
more quickly the second time exposure
occurs
Immunity: molecular memory
Other Roles of Protein
Source of energy and glucose in
starvation or insufficient carbohydrate
intake (gluconeogenesis)
Blood clotting by producing fibrin, which
forms a solid clot.
Vision by creating light-sensitive
pigments in the retina (opsin)
Preview of Protein Metabolism
Protein turnover & amino acid pool
Continual production and destruction
Amino acid pool pattern is fairly
constant
Used for protein production
Used for energy if stripped of
nitrogen, degrades/converts to
glucose or stored as TG
Nitrogen Balance
Zero Nitrogen Balance:
synthesis = degradation
Positive and negative nitrogen balance
Amino acids from food are called
exogenous- protein ingested
Amino acids from within the body are
called endogenous- protein
Nitrogen Balance Determinants
Positive
Growing years
Pregnancy
Recovery, healing
Negative
Burns, injuries
Diseases, infections
Starvation or very low-protein diet
Preview of Protein Metabolism
Making other compounds from amino acids
Neurotransmitters (epi- and norepi-), melanin
pigment and thyroxine are made from tyrosine.
Niacin and serotonin made from tryptophan.
Energy from glucose and fatty acids preferred
Body has no protein “storage” like adipose
or glycogen
Inadequate dietary protein- wasting of lean
body tissue
Preview of Protein Metabolism
Fat production from excess protein
Energy and protein exceed needs
Carbohydrate intake is adequate
Can contribute to weight gain
Deaminating amino acids
Stripped of nitrogen-containing amino group
Ammonia
Keto acid
Amino Acids for Energy and Fat
Muscle and organ protein available for
energy if needed
Amino acids whittled down to glucose,
nitrogen exits in urine.
Excess calories in protein form are
deaminated (nitrogen excreted) and
converted into fat
Preview of Protein Metabolism
Make proteins & nonessential amino acids
from dietary protein
Breakdown of body protein to obtain
essential amino acid not in diet
Keto-acid + N needed for nonessentials
Liver cells and nonessential amino acids
Converting ammonia to urea
Liver – ammonia and carbon dioxide
Dietary protein
Transamination and Synthesis
of Nonessential Amino Acid
Side
group
Keto acid A
Side
group
+
Amino acid B
Side
group
Amino acid A
Side
group
+
Keto acid B
The body can transfer amino groups (NH2) from an amino acid to a keto acid,
forming a new nonessential amino acid and a new keto acid. Transamination
reactions require the vitamin B6 coenzyme.
Side
group
Side
group
Amino acid
Keto acid
Deamination
of a
Nonessential
Amino Acid
The deamination of an amino acid
produces ammonia (NH3) and a keto acid.
Side
group
Keto acid
Side
group
Amino acid
Given a source of NH3, the body can make
nonessential amino acids from keto acids.
Synthesis
of a
Nonessential
Amino Acid
Ammonia (NH3)
Byproduct of deamination from protein
metabolism
In the liver: 2NH3 + CO2 = H2O + urea
Liver releases urea into blood
Kidneys filter urea out of blood
Protein intake, Urea production
Water consumption needed to avoid
dehydration
Ammonia
Carbon
dioxide
Ammonia
UREA SYNTHESIS
Water
Urea
Amino acids
Bloodstream
Ammonia (NH3)
+
CO2
Liver
Urea
Urea
Bloodstream
Kidney
Urea
To bladder and
out of body
Converting Ammonia to Urea
Ammonia and carbon dioxide are combined
in the liver to make urea, body’s principle
vehicle for excreting unused nitrogen
Liver Dz: High serum NH3
The kidneys filter urea out of the blood.
Renal Dz: High serum urea
Protein Quality
Two factors
Digestibility
With other foods consumed
Animal (90-99%) vs. plant proteins (>90% for
soy and legumes)
Amino acid composition
Essential amino acid consumption
Nitrogen-containing amino groups
Limiting amino acid thwarts synthesis
Protein Quality
Reference protein- the protein gold standard
Preschool-age children’s requirements
High-quality proteins
Animal proteins
Plant proteins
Complementary proteins
Low-quality proteins combined to provide
adequate levels of essential amino acids
Ile
Legumes
Grains
Together
Lys
Met
Trp
Complementary Protein
Protein Regulations for Food
Labels
Quantity of protein in grams
Percent Daily Value
Not mandatory unless
Protein claims
Consumption by children under 4 years old
Quality of protein also figures into DV
Protein-Energy Malnutrition
(PEM)
Insufficient intake of protein, energy, or both
Prevalent form of malnutrition worldwide
Impact on children
Poor growth
Most common sign of malnutrition
Adult PEM in AIDS, TB, anorexia nervosa
Conditions leading to PEM- food shortage
Protein-Energy Malnutrition
(PEM)
Marasmus
Chronic PEM
Children 6 to 18 months
Poverty
Little old people – just “skin and bones”
Impaired growth, wasting of muscles,
impaired brain development, lower body
temperature
Digestion and absorption
Protein-Energy Malnutrition
(PEM)
Kwashiorkor
Acute PEM
Children 18 months to 2 years
Develops rapidly
Aflatoxins
Edema, fatty liver, inflammation, infections,
skin and hair changes, free-radical iron
Marasmus-Kwashiorkor mix
Protein-Energy Malnutrition
Protein-Energy Malnutrition
(PEM)
Infections
Degradation of antibodies
Fever.
Fluid imbalances and dysentery.
Anemia
Dysentery
Heart failure and possible death.
Rehydration and nutrition intervention
Health Effects of Protein
High-protein diets
Heart disease
Animal protein /animal fat intake
Homocysteine levels
Cancer
Animal foods, not protein content of diet
Acceleration of kidney deterioration
Health Effects of Protein
High animal protein diets
Osteoporosis
Calcium excretion increases
Weight control
Satiety
Adequate protein, moderate fat, and sufficient
carbohydrate better support weight loss.
Recommended Protein Intakes
Need for dietary protein
Source of essential amino acids
Practical source of nitrogen
10 to 35 percent of daily energy intake
RDA
Adults: 0.8 grams / kg of body weight / day
Athletes: 1.2-1.7 g/kg/day
Elderly: 1.0-1.2 g/kg/day unless diabetic
Pregnant / Lactating: 1.1-1.3 g/kg/day
Recommended Intakes of Protein
Protein in abundance
Intake in U.S., Canada and most developed
countries
Self-inflicted protein deficiencies
Key diet principle – moderation
Nutritional Genomics
New field
Nutrigenomics
Nutrients influence gene activity
Nutrigenetics
Genes influence activity of nutrients
Human genome
Genomics Primer
1 The human genome is a
Cell
Nucleus
1
complete set of genetic
material organized into 46
chromosomes, located
within the nucleus of a cell.
2 A chromosome is made
2
of DNA and associated
proteins.
Chromosome
3 The double helical
5
3 DNA
Gene
structure of a DNA
molecule is made up of two
long chains of nucleotides.
Each nucleotide is
composed of a phosphate
group, a 5-carbon sugar,
and a base.
sequence of nucleotide
4 The
bases (C, G, A, T)
4
determines the amino acid
sequence of proteins.
These bases are connected
by hydrogen bonding to
form base pairs—adenine
(A) with thymine (T) and
guanine (G) with cytosine
(C).
5 A gene is a segment of DNA
that includes the information
needed to synthesize one or
more proteins.
Nutritional Genomics
Genes
Food and nutrients
Nutritional
genomics
Nutritional genomics examines the interactions of genes and nutrients. These
interactions include both nutrigenetics and nutrigenomics.
Genes
Nutrigenetics
Nutrient absorption
Nutrient use and metabolism
Nutrient requirements
Food and nutrient tolerances
Nutrigenetics (or nutritional genetics) examines how genes influence the activities
of nutrients.
Gene mutation
Gene expression
Gene programmingaa
Food and nutrients
Nutrigenomics
Nutrigenomics, which includes epigenetics, examines how nutrients influence the
activities of genes.
A Genomics Primer
DNA
46 chromosomes
Nucleotide bases
Gene expression
Genetic information to protein synthesis
Gene presence vs. gene expression
Epigenetics
DNA methylation
Nutrients and phytochemicals
1 Nutrients and phytochemicals
1
Substances
generated during
metabolism
can interact directly with
genetic signals that turn
genes on or off, thus
activating or silencing gene
expression, or indirectly by
way of substances generated
during metabolism.
Gene expression activated
or silenced
2
Protein synthesis starts
or stops
3
2 Activating or silencing a
gene leads to an increase
or decrease in the synthesis
of specific proteins.
3 These processes ultimately
affect a person’s health.
Disease prevention
or progression
Genetic Variation and Disease
Genome variation
About 0.1 percent
Goal of nutritional genomics
Customize recommendations that fit
individual needs
Single-gene disorders
Phenylketonuria (PKU)
Genetic Variation and Disease
Multigene disorders
Study expression and interaction of multiple
genes
Sensitive to environmental influences
Example
Heart disease
Single nucleotide polymorphisms (SNPs)