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Essential Chemistry for Biology
Chapter 2
Tracing Life Down to the Chemical Level
Basic Chemistry
Matter
Anything that takes up
space and has mass
Can exist as a liquid,
solid, or gas
Elements
Basic building block of
matter
92 naturally occurring
elements
Basic Chemistry
Only 6 elements that make up most
of the body weight of organisms
C
Carbon
H
Hydrogen
N
Nitrogen
O
Oxygen
P
Phosphorus
S
Sulfur
Trace Elements
Trace elements make up 0.01% of human
body weight, but still very important
Each Element Consists of ONE
Kind of Atom
Smallest unit that retains the properties
of a given element
And to enter a chemical reaction
Composed of subatomic particles:
Protons (p+)
Neutrons
Electrons (e-)
Move @ atomic nucleus
Usually (e-) = (p+)
Electrically neutral
Atomic Symbol
Atomic Mass =
Number of Protons +
Number of Neutrons
Atomic Number = The Number of Protons
in the Nucleus
Valence Shell
Molecules and Compounds
Molecules
Chemical bonding that joins atoms
Some contain atoms of only one element
Compounds
Atoms of two or more different elements
N2
H 2O
Mixture
Two or more molecules mingling together
Chemical Bonds
Atoms are held together by bonds
3 main types:
Ionic bond
Covalent bond
Accept or donate electrons
Share one or more electrons
Hydrogen bond
Ionic Bond
Atoms gain and lose
electrons
Ion
Balance between protons
and electrons shifts
Become “ionized”
Atom that has a charge
Losing an electron results
in a net positive
Gaining an electron results
in a net negative charge
Ionic bond
Association of two ions
that have opposing
charges
Which will form an ionic bond?
Argon (Ar)
Chlorine (Cl)
Potassium (K)
Helium (He)
Can Mg and Cl form an ionic bond?
Chlorine (Cl)
Magnesium (Mg)
Covalent Bond
Covalent bond
Stable and stronger
than ionic bonds
Atoms share
electrons
Each atom will
have a completed
outer shell
Bond Notation
Single covalent
bonds are written
as H-H
Double covalent
bonds are written
as O=O
A covalent bond can be nonpolar
or polar
Nonpolar
covalent bond
Sharing of electrons
between atoms is
fairly equal
Polar covalent
bond
Unequal sharing of
electrons
Hydrogen Bond
Hydrogen bond
Weak attraction
Form and break
easily
Occurs between
polar molecules
Polar bonds have
charges on either
end and often
attract to each
other
Chemical Reactions
Cells constantly rearrange molecules
by breaking existing chemical bonds
and forming new ones
Reactants
Products
Starting materials
End materials
Chemical reactions cannot create or
destroy matter,
They only rearrange it
Solvent of life
Water dissolves other polar
substances
Solvent
Solute
A dissolved substance
Hydrophilic
Ions and polar molecules
easily dissolve in it
water-loving molecules
form hydrogen bonds with
water
Hydrophobic
water-fearing molecules
do not form hydrogen
bonds with water
Acids and Bases
When water ionizes, it releases an equal
number of hydrogen ions (H+) and
hydroxide ions (OH-)
Some substances release more or fewer or
each
Acids - Excess hydrogen ions
Bases - Excess hydroxide ions
Acidic and Basic Solutions
Acidic Solutions
Sharp, sour taste
Molecules that
dissociate in water
Release
hydrogen ions
(H+)
Basic Solutions
Bitter taste
Molecules that
either take up
hydrogen ions (H+)
or release
hydroxide ions
(OH-)
pH Scale
The pH Scale
Ranges from 0 - 14
pH below 7 is acidic
pH above 7 is alkaline
pH of 7 is neutral
[H+] > [OH-]
[OH-] > [H+]
[H+] = [OH-]
Buffer
Chemical or combination of chemicals that
keeps pH within normal limits