Presentation - The University of Arizona College of Optical Sciences
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Absolute Photon Calibration of
Zeiss Observer Z1 Microscope
Shawn Miller
Department of Optical Sciences
University of Arizona, Tucson, AZ 85721
Optics 521 Presentation
December 8, 2008
Absolute Photon Calibration
• Detectors give
relative light intensity
values.
• Must provide
reference to actual
photon numbers for
the detector’s value.
• “Standard” lamp
which has been
calibrated to national
standards.
Standard Lamp
• Tungsten ribbon
filament lamp.
– Temperature is
calibrated for several
currents.
• Stable high current
power supply.
• High wattage resistor.
• Photon emission is
given by Plank’s
curve.
Lamp Calibration Form
• Calibrated at hottest
(most central) area of
the filament.
• Calibrated in the
vertical position.
• 20% variation in lamp
emission.
– Area of filament
viewed by optical
setup is very
important.
Plank’s Curve
• Absolute temperature.
– 1/ Ta = 1/ Tb + (λ/C2)*[ln(ε(λ)) +
ln(τ(λ))]
•
•
•
•
Ta = Absolute temperature
Tb = Brightness temperature
λ = Wavelength of radiation
C2 = Plank’s second constant
= hc/Kb
• ε(λ) = Emissivity at emitting
wavelength
• τ(λ) = Transmission of pyrex
envelope.
• L(λ) = ε(λ,Ta)*τ(λ)*[2hc2/λ5]
/ (ehc/λKbTa – 1).
– Integrate over wavelength
region being observed.
Collecting the Lamp’s Light
• Φ = ∫L(λ)dλ*A*Ω.
– Φ = Flux of light.
• Watts, or ergs/second.
– ∫L(λ)dλ = Radiance.
• W/m2*Sr
– A = Area of filament.
• m2
– Ω = Solid Angle.
• Sr
Zeiss Observer Z1 Microscope
•
•
•
•
EMCCD camera.
Three objectives.
8 wavelength filters.
6 gain settings.
– Detector’s response is
different for each
setting.
A Simple Design
• Small central area of
the filament imaged
onto the focal plane
the objective lens.
• Lamp stand, two
lenses, mirror, and
stop.
Design Details
• First lens mount.
– Barrel mount.
– Axially adjustable by
threading the mount
into the lamp housing.
– About one focal length
from filament.
– Off Axis alignment is a
one time adjustment of
setscrews.
Design Details
• Mirror mount /
aperture stop.
– Adjustable kinematic
mirror mounted above
aperture at 45°
– One time adjustable
height.
– Base for aperture
slide.
– Connection to
microscope.
Design Details
• Second lens mount.
– Adjustable height.
– One time off axis
adjustment.
• Fixed in place with
epoxy.
• Microscope’s stage
acts as fine system
adjustment when
removing and
replacing system.
System Alignment
•
•
•
•
•
Set lamp height.
Adjust first lens.
Adjust mirror height.
Set mirror alignment.
Center second lens.
– Epoxy in place.
• Adjust second lens
height.
635.2 µm
31
6.2
5µ
m
Measurements
• Calculate first lens to filament distance. (z1)
– Measure width of filament spot on wall and distance to wall.
– z1 = (-Wf/Ww)*(DL1w).
• Aperture radius measured with 10x objective. (Rs)
• Distance from first lens to stop and to the second lens
measured with caliper. (DL1S, DL1L2)
Solid Angle
• 1/z1’ = 1/z1 + 1/f1.
• RL1 = Rs +
[Rs/(z1’–(DL1s))]*(DL1s).
– RL1 = Radius of light
spot on first lens.
• Ω = π RL12/z12
Area of Filament / Magnification
• Radius of the filament being imaged onto the
objective lens focal plane. (Rfo)
– Rfo = z1*(Rs/(DL1s).
• Radius of the filament image in the objective
lens focal plane. (Ro)
• m = -Ro / Rfo.
• 100x and 40x objective.
635.2 µm
31
6.2
5µ
– Wf = Wfov / m.
– Af = (Wfov / m)2.
m
• Area of the filament viewed by the microscope.
Number of Photons
• Φ = L*A*Ω*TL*Rm.
– TL = Transmission of lenses.
– Rm = Reflectivity of mirror.
• Theoretical # Photons = (Φ*t*λ) / (h*c).
– t = Exposure time.
– λ = Central wavelength.
– h = Plank’s constant.
– c = Speed of light.
• Calibration factor = #Pt / Detector reading.
References
• Kowalski, Brian. Absolute calibration of a spectrometer through the
ultraviolet. Department of Physics Thesis, 1993.
• Bickel, William. Absolute intensity calibration of a spectrometer
using a blackbody radiation source. Short paper, September 2001.
• Merchant, John. Blackbody calibration sources function as
standards. Laser focus world, April 1995.
• Stair, Ralph. Standard of Spectral Radiance for the Region of 0.25
to 2.6 microns. Journal of Research of the National Bureau of
Standards, Physics and Chemistry Vol. 64A, No.4, July-August
1960.
• G.A.W., Rutgers. “Relation between brightness, temperature, true
temperature and color temperature of tungsten. Luminance of
tungsten.”