Transcript Slide 1
Biogeochemical Cycles
• Carbon and Nitrogen
LIFE
• Living things contain matter in a highly
organized, low-entropy state; they can
capture, store, and transmit energy.
• Organisms are also capable of
reproduction and change through time.
The Biological Pump
• The biological pump is the process by
which CO2 fixed in photosynthesis is
transferred to the ocean interior
resulting in a temporary or permanent
storage of carbon.
• This biogeochemical process
involving plants, the animals that
consume them, and the bacteria that
assimilate their waste plays a central
role in the global carbon cycle.
Biogeochemical Cycles
• Natural processes that recycle nutrients in
various chemical forms from the nonliving
environment to living organisms and then
back to the nonliving environment
Chemicals used by organisms
• Organisms use chemicals in their
metabolism
• Carbon
• Oxygen
• Hydrogen
• Nitrogen (proteins, nucleic acids)
CARBON
• The basic building block of life
• Carbon enters the atmosphere though;
respiration
volcanic eruptions
release from rocks deep in earth’s crust
burning of fossil fuels
Photosynthesis
• Carbon dioxide is removed from the
atmosphere by producers that use CO2,
sunlight and nutrients to make food
through the process of photosynthesis.
• Plants FIX carbon into usable forms
(sugar)
CO2
Photosynthesis
Phytoplankton
Respiration
• Some CO2 is then released back into the
water through respiration as the plankton
break down their food to release energy.
CO2
Photosynthesis
Respiration
Phytoplankton
Consumption
• Some of the carbon is passed on to
primary consumers: zooplankton (animal
plankton) and other filter feeders that
depend on phytoplankton for their energy.
CO2
Photosynthesis
Respiration
Phytoplankton
Zooplankton
Consumption
Decomposition
• Bacteria play a vital role in the biological
pump by decomposing organic particles
such as waste products and dead
organisms that sink to the deep sea
(Aerobic decomposition releases CO2).
Microbial Loop
• Dissolved organic carbon (DOC) is used by
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bacteria
Bacteria is eaten by protozoan
Protozoan are eaten by zooplankton
Zooplankton is eaten by fish
Fish excrete DOC
DOC is eaten by bacteria
And so on…
CO2
Photosynthesis
Respiration
Phytoplankton
Zooplankton
Decomposition
Consumption
Bacteria
Higher Trophic Levels
• Consumption continues to transport
carbon through higher trophic levels.
CO2
Respiration
Respiration
Photosynthesis
CO2
Phytoplankton
Zooplankton
Decomposition
Consumption
Higher Level
Consumers
Consumption
Decomposition
Bacteria
Higher Trophic Levels
• The process continues…
CO2
Respiration
Phytoplankton
Zooplankton
Decomposition
Consumption
Higher Level
Consumers
Consumption
Decomposition
Bacteria
CO2
Respiration
Respiration
Photosynthesis
CO2
Nitrogen
• Critical component of proteins, chlorophyll
and nucleic acids
• Found in the bodies of organisms in
different forms…
Nitrogen input
• Nitrogen is added to the ocean by;
river runoff
precipitation
nitrogen-fixing organisms
Useable nitrogen
• 48% of dissolved gas in seawater is
nitrogen
• Organisms can not use free nitrogen
• Must be bound to oxygen or hydrogen
• Bacteria fix nitrogen (make it bigger)
• Plant growth is limited because of the
limited source of useable nitrogen
Nitrogen and animals
• As dissolved organic ions (waste):
ammonium NH4+
nitrite NO2nitrate NO3-
Nitrogen and plants
• Small oceanic plants use mostly nitrate
(fertilizer)
• Fish eat the plants and excrete ammonia
and urea.
• Mulm the technical term for what comes
out of the vent
• Then bacteria fixes the mulm into useable
fertilizer for plants again
In an aquarium
• Ammonia is in fish waste and is also
released through gills when they absorb
oxygen (breathe)
• Ammonia can be changed into a toxic
form called Ammonium depending on pH
levels, temperature, and salinity
• High levels of ammonium can kill fish
3 KINDS OF FILTRATION USED TO
GET RID OF WASTE
BIOLOGICAL: Bacteria ingest waste and
convert it.
CHEMICAL: O3 binds to “junk” in the water
and makes it easier to remove. Carbon
also removes impurities from the water.
PHYSICAL: Water flows through mechanical
filter plates and the waste gets trapped.
Micron filter and cotton filter
Ozone generator and carbon filter
Nitrifying Bacteria
• Nitrobacter and nitrosomonas (the good kind
of bacteria)
• Converts ammonia and nitrites into nitrates
• Denitrifying bacteria turns nitrates back
into nitrites and free ammonia
• This keeps the cycle going
Nitrosomonas europaea
Where the bacteria lives
• On any clean, hard surface
• Aerobic NEED oxygen
• Examples:
gravel
bioballs
filter plates
Problems with Aquariums
• Temperature
• Bacteria populations
• Parasites
• Stress
Parasites
• Worms;
Nematodes (round worms)
Trematodes (hooks and suckers)
Nematodes found in
gut (usually)
Trematodes found
in gills or on
outside of body.
Little parasites…
• Ciliated Protozoans;
Ichthyopthirius multifiliis (ICH) fresh
Cryptocaryon (crypt) salt
ICH and CRYPT
• Appears as white spots anywhere on a fish
• Fish will rub against rocks etc. because its
itchy
• Very contagious
• Spreads rapidly
• Is always present but will “take over” if a
fish’s immune system is suppressed by;
stress, sudden change in temp, etc.
Ichthyopthirius multifiliis
(ICH)
Cryptocaryon (crypt)
Treatments (FYI)
• If you are treating Ich use a salt water
bath
• If you are treating crypt use a fresh water
bath
• If your tank has NO invertebrates you can
use a copper solution (but they can build a
tolerance to this over time)