Transcript Additional file 6

Additional file 6
Figure 1. Gene Ontology analysis of glomerulus proteome using
Cellular Component and Molecular Function vocabularies
All the identified proteins of the non-redundant, high-confidence
dataset of glomerulus proteome consisting of 1,817 unique proteins
representing 1,478 unique genes were analyzed based onGene
Ontology (GO) Cellular Component (Panel A) and GO Molecular
Function (Panel B) vocabularies using PANTHER version 7 [7]. The
number of hits to each of the GO terms are indicated.
Figure 2. Gene Ontology analysis of glomerulus proteome using
Biological Process vocabulary
All the identified proteins of the non-redundant, high-confidence
dataset of glomerulus proteome consisting of 1,817 unique proteins
representing 1,478 unique genes were analyzed. In Panel A, the
proteins were analyzed on the basis of GO Biological Process
vocabulary by using PANTHER version 7 [7]. The number of hits to
each of GO terms is indicated. In Panel B, enrichment analysis was
performed on the basis of GO Biological Process vocabulary using
Cytoscape version 2.82 coupled with BinGO plug-in [8] using the
results of products of whole human genes as a background. Only
terms with hits significantly higher than those of human genes are
shown. Statistical significance was assessed as described in the text.
Figure 3. PANTHER Protein Class analysis of glomerulus
proteome
All the identified proteins of the non-redundant, high-confidence
dataset of glomerulus proteome consisting of 1,817 unique proteins
representing 1,478 unique genes were analyzed using PANTHER
Protein Class analysis.
A
B
Fig. 1 Cui et al
A
B
Fig. 2 Cui et al
Fig. 3 Cui et al