Transcript 6. AUA - Crops2Industry

Crops2Industry
“Non-food Crops-to-Industry schemes in
EU27”
WP 2
Tasks: 2-1 to 2-3
Task leader: Dimitra Milioni
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Work Package 2: Plant breeding
Objectives: To identify current molecular genetic
technologies (genomic and biotechnological tools) and
suggest their potential applications in a crop-specific
manner to address a wide range of breeding constraints
•Task 2.1: To survey the generic tools currently available
for the selected non-food crops/species research, breeding
production and processing
•Task 2.2: To identify European Genetic Resource Centres
•Task 2.3: To capitalize on biotechnology tools and exploit
the knowledge of the post genomic era for possible future
non-food crops improvement
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Spanning the gap between genomics and
breeding.
Varshney et al., 2010
CROPS
TO
INDUSTRY
Work Package 2: Plant breeding
Objectives: To identify current molecular genetic
technologies (genomic and biotechnological tools) and
suggest their potential applications in a crop-specific
manner to address a wide range of breeding constraints
•Task 2.1: To survey the generic tools currently available
for the selected non-food crops/species research, breeding
production and processing
•Task 2.2: To identify European Genetic Resource Centres
•Task 2.3: To capitalize on biotechnology tools and exploit
the knowledge of the post genomic era for possible future
non-food crops improvement
CROPS
TO
INDUSTRY
European Genetic Resource Centres
Germplasm as a starting point
European Cooperative Crop Genetic Resources Program (ECPGR)
EURISCO, a web-based catalogue
Centre for Genetic Resources, The Netherlands (CGN)
Centre for Plant Genetic Resources Poland, Blonie, Poland
Istituto di Genetica Vegetale (Germplasm Research Institute), Italy
The Nordic Gene Bank, Alnarp, Sweden
The Research Institute of Crop Production, Czech Republic
UK Plant Genetic Resources Group, UK
Germplasm Resources Information Network (GRIN), USA
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CROPS
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Molecular Genomics Resource Centres
Not one gene but all the genes
European Molecular Biology Laboratory – European
Bioinformatics Institute (EMBL-EBI)
National Centre for Biotechnology Information (NCBI)
DNA Databank in Japan (DDBJ)
The Institute for Genome Research (TIGR)
PlantGDB
Brassica Genome Gateway
GRAMENE
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CROPS
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CROPS
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Orthologous gene families between sorghum, Arabidopsis, rice
and poplar.
Whole genome shotgun
sequencing project
AH Paterson et al. Nature 457, 551-556 (2009) doi:10.1038/nature07723
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Alignment of sorghum, rice and maize.
AH Paterson et al. Nature 457, 551-556 (2009) doi:10.1038/nature07723
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Molecular markers to study genetic diversity
in sogrhum germplasms
Simple Sequence Repeats (SSR)
Inter Simple Sequence Repeats (ISSR)
Random Amplified Polymorphic DNA (RAPD)
Amplified Fragment Length Polymprphism (AFLP)
Diversity Arrays Technology (DArT)
Single Feature Polymorphism (SFP)
Quantitative Trait Locus (QTL)
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Genetic mapping of QTLs for sugar-related traits in a RIL
population of Sorghum bicolor L. Moench
Shiringani et al., TAQ (2010); 121(2):32336.
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An Induced Sorghum Mutant Population
Gallery of selected mutant phenotypes
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Section of the leaf blade from BTx623, P5A3, and P7H6
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Genetic transformation of Sorghum
Production of transgenic sorghum plants
Plant Cell, Tissue and Organ Culture
doiI: 10.1007/s11240-007-9228-1
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Development of transgenic sorghum for insect resistance against
the spotted stem borer (Chilo partellus).
TRANSGENIC SWEET SORGHUM WITH ALTEREDLIGNIN COMPOSITION AND PROCESS OF
PREPARATION THEREOF (United StatesPatent Application 20100058496)
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Crops2Industry
“Non-food Crops-to-Industry schemes in
EU27”
Thank you for your attention
CROPS
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