Transcript acat2000
ACAT2000, Fermilab, Oct 19, 2000
Large Scale Computations in
Astrophysics: Towards a
Virtual Observatory
Alex Szalay
Department of Physics and Astronomy
The Johns Hopkins University
Nature of Astronomical Data
• Imaging
– 2D map of the sky at multiple wavelengths
• Derived catalogs
– subsequent processing of images
– extracting object parameters (400+ per object)
• Spectroscopic follow-up
– spectra: more detailed object properties
– clues to physical state and formation history
– lead to distances: 3D maps
• Numerical simulations
• All inter-related!
Imaging Data
3D Maps
N-body Simulations
Trends
Future dominated by detector improvements
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CCDs
• Moore’s Law growth in
CCD capabilities
• Gigapixel arrays on the
horizon
• Improvements in computing
and storage will track growth
in data volume
• Investment in software is
critical, and growing
Glass
Total area of 3m+ telescopes in the world in m2, total number
of CCD pixels in Megapix, as a function of time. Growth over
25 years is a factor of 30 in glass, 3000 in pixels.
The Age of Mega-Surveys
• The next generation mega-surveys and archives will
change astronomy, due to
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top-down design
large sky coverage
sound statistical plans
well controlled systematics
• The technology to store and access the data is here
we are riding Moore’s law
• Data mining will lead to stunning new discoveries
• Integrating these archives is for the whole community
=> Virtual Observatory
Ongoing surveys
• Large number of new surveys
– multi-TB in size, 100 million objects or more
– individual archives planned, or under way
• Multi-wavelength view of the sky
– more than 13 wavelength coverage in 5 years
• Impressive early discoveries
– finding exotic objects by unusual colors
• L,T dwarfs, high-z quasars
– finding objects by time variability
• gravitational microlensing
MACHO
2MASS
DENIS
SDSS
GALEX
FIRST
DPOSS
GSC-II
COBE
MAP
NVSS
FIRST
ROSAT
OGLE
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The Necessity of the VO
• Enormous scientific interest in the survey data
• The environment to exploit these huge sky surveys
does not exist today!
– 1 Terabyte at 10 Mbyte/s takes 1 day
– Hundreds of intensive queries and thousands of casual
queries per-day
– Data will reside at multiple locations, in many different formats
– Existing analysis tools do not scale to Terabyte data sets
• Acute need in a few years, solution will not just happen
VO- The challenges
• Size of the archived data
40,000 square degrees is 2 Trillion pixels
– One band
4 Terabytes
– Multi-wavelength
10-100 Terabytes
– Time dimension
10 Petabytes
• Current techniques inadequate
– new archival methods
– new analysis tools
– new standards
• Hardware/networking requirements
– scalable solutions required
• Transition to the new astronomy
VO: A New Initiative
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Priority in the Astronomy and Astrophysics Survey
Enable new science not previously possible
Maximize impact of large current and future efforts
Create the necessary new standards
Develop the software tools needed
Ensure that the community has network and
hardware resources to carry out the science
New Astronomy- Different!
• Data “Avalanche”
– the flood of Terabytes of data is already happening,
whether we like it or not
– our present techniques of handling these data do not scale
well with data volume
• Systematic data exploration
– will have a central role
– statistical analysis of the “typical” objects
– automated search for the “rare” events
• Digital archives of the sky
– will be the main access to data
– hundreds to thousands of queries per day
Examples: Data Pipelines
Examples: Rare Events
Discovery of several new
objects by SDSS & 2MASS
SDSS T-dwarf
(June 1999)
Examples: Reprocessing
Gravitational lensing
28,000 foreground galaxies over 2,045,000 background
galaxies in test data (McKay etal 1999)
Examples: Galaxy Clustering
• Shape of fluctuation spectrum
– cosmological parameters and initial conditions
• The new surveys (SDSS) are the first when logN~30
• Starts with a query
• Compute correlation function
– All pairwise distances N2, N log N possible
• Power spectrum
– Optimal: the Karhunen-Loeve transform
– Signal-to-noise eigenmodes
– N3 in the number of pixels
• Needs to be done many times over
Relation to the HEP Problem
• Similarities
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need to handle large amounts of data
data is located at multiple sites
data should be highly clustered
substantial amounts of custom reprocessing
need for a hierarchical organization of resources
scalable solutions required
• Differences of Astro from HEP
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data migration is in opposite direction
the role of small queries is more important
relations between separate data sets (same sky)
data size currently smaller, we can keep it all on disk
Data Migration Path
Tier 0
Tier 1
portal
Tier 2
Tier 3
HEP
Astro
Queries are I/O limited
• In our applications few fixed access patterns
– one cannot build indices for all possible queries
– worst case scenario is linear scan of the whole table
• Increasingly large differences between
– Random access
• controlled by seek time (5-10ms), <1000 random I/O /sec
– Sequential I/O
• dramatic improvements, 100 MB/sec per SCSI channel easy
• reached 215 MB/sec on a single 2-way Dell server
• Often much faster to scan than to seek
• Good layout => more sequential I/O
Distributed Archives
• Networks are slower than disks:
– minimize data transfer
– run queries locally
• I/O will scale linearly with nodes
– 1 GB/sec aggregate I/O engine can be built for <$100K
• Non-trivial problems in
– load balancing
– query parallelization
– queries across inhomogeneous data sources
• These problems are not specific to astronomy
– commercial solutions are around the corner
Geometric Approach
• Main problem
– fast, indexed searches of Terabytes in N-dim space
– searches are not axis-parallel
• simple B-tree indexing does not work
• Geometric approach
– use the geometric nature of the data
– quantize data into containers of `friends’
• objects of similar colors
• close on the sky
• clustered together on disk
– containers represent coarse-grained map of the data
• multidimensional index-tree (eg KD-tree)
Geometric Indexing
“Divide and Conquer”
Partitioning
Attributes
Number
Sky Position
Multiband Fluxes
Other
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N = 5+
M= 100+
3NM
Hierarchical
Triangular
Mesh
Split as k-d tree
Stored as r-tree
of bounding boxes
Using regular
indexing
techniques
SDSS: Distributed Archive
User Interface
Analysis Engine
Master
SX Engine
Objectivity Federation
Objectivity
Slave
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Objectivity
Slave
Objectivity
RAID
Objectivity
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Objectivity
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Computing Virtual Data
• Analyze large output volumes next to the database
– send results only (`Virtual Data’):
the system `knows’ how to compute the result (Analysis Engine)
• Analysis: different CPU to I/O ratio than database
– multilayered approach
• Highly scalable architecture required
– distributed configuration – scalable to data grids
• Multiply redundant network paths between
data-nodes and compute-nodes
– `Data-wolf’ cluster
SDSS Data Flow
A Data Grid Node
Compute node
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Compute node
Compute layer
Hardware requirements
200 CPUs
• Large distributed database engines
– with few Gbyte/s aggregate I/O speed
• High speed (>10 Gbit/s) backbones
– cross-connecting the major archives
• Scalable computing environment 10 Gbits/s Other nodes
Objectivity
Objectivity
RAID
Objectivity
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Objectivity
RAID
Objectivity
RAID
Objectivity
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Objectivity
RAID
– with hundreds of CPUs for analysis
RAID
Interconnect layer
1 Gbits/sec/node
RAID
Database layer
2 GBytes/sec
SDSS in GriPhyN
• Two Tier 2 Nodes (FNAL + JHU)
– testing framework on real data in different scenarios
• FNAL node
– reprocessing of images
• fast and full regeneration of catalogs from the images on disk
• gravitational lensing, finer morphological classification
• JHU node
– statistical calculations, integrated with catalog database
• tasks require lots of data, can be run in parallel
• various statistical calculations, likelihood analyses
• power spectra, correlation functions, Monte-Carlo
Clustering of Galaxies
Generic features of galaxy clustering:
• Self organized clustering driven by long range forces
• These lead to clustering on all scales
• Clustering hierarchy: distribution of galaxy counts is
approximately lognormal
• Scenarios: ‘top-down’ vs ‘bottom-up’
Clustering of Computers
• Problem sizes have lognormal distribution
– multiplicative process
• Optimal queuing strategy
– run smallest job in queue
– median scale set by local resources: largest jobs never finish
• Always need more computing
– ‘infall’ to larger clusters nearby
– asymptotically long-tailed distribution of compute power
• Short range forces: supercomputers
• Long range forces: onset of high speed networking
• Self-organized clustering of computing resources
– the Computational Grid
Conclusions
• Databases became an essential part of astronomy:
most data access will soon be via digital archives
• Data at separate locations, distributed worldwide,
evolving in time: move queries not data!
• Computations in both processing and analysis will be
substantial: need to create a `Virtual Data Grid’
• Problems similar to HEP, lot of commonalities, but
data flow more complex
• Interoperability of archives is essential:
the Virtual Observatory is inevitable
www.voforum.org
www.sdss.org