Transcript Slide 1

The Western (English) Channel Observatory as a test
bed for improving ecosystem forecasts.
‘Growing concern about human influence on marine ecosystems conflicts with
our inability to separate man-made from ‘natural’ change. This limitation results
from lack of adequate baselines and uncertainty as to whether observed changes
are local or on a broad scale. Long-term monitoring programmes should be
able to solve both these deficiencies’ (Duarte et al, 1992. Nature)
www.westernchannelobservatory.org.uk
Icarus Allen, Tim Smyth et al. PML
Sustained Observations in the Western English Channel: past,
present and future.
Plymouth time series since 1900
Geographical Region
Overall aims and purpose
Our purpose is to integrate in situ measurements made at stations L4, L5, E1
and adjacent coasts in the western English Channel (see Fig 3) with ecosystem
modelling studies and Earth observation; this will be facilitated by web-based
GIS technology. which allows the following science questions to be addressed
at a range of temporal and spatial scales:
•What is the current state of the ecosystem?
•How
has
theChannel:
ecosystem changed?
Western
English
• boundary region between oceanic and neritic waters;
•Improve
short term forecasts of the state of the ecosystem.
• straddles biogeographical provinces;
• both boreal / cold temperate &
• A national facility for EO algorithm development, calibration and
• warm temperate organisms
validation.
• considerable fluctuation of flora and fauna since
records began.
Southward et al. (2005) Adv. Mar. Biol., 47
Web (Webmap server)
• each element has strengths
and weaknesses – synergy.
Database (SQL)
Virtual Observatory
MECN:
Knowledge
Transfer /
policy
advice
Modelling
Data
ERSEM
Met Office (NCOF)
Remote Observatory
In-situ sampling (L4, E1, L5, buoy, etc.)
Remote Sensing
long-term time-series (linked to non WCO
series via MECN)
SST, Ocean Colour
scientific investigation
Other sensors
In-Situ Sampling
In situ sampling
i) Marine measurements:
OPERATIONS: weekly sampling @ L4; fortnightly @ E1
• The Observatory consists of the core measurements:
• Hydrography (CTDf);
• Nutrients;
• Optics;
• Pigments;
• Zooplankton and phytoplankton
ii) Atmospheric measurements:
• meteorological stations (PML, Rame Head)
• sun photometric aerosol retrievals (PML)
Latest Hydrography
The year so far (L4) …
L4 - Zooplankton time-series
vertical net hauls: from the sea floor (~55m) to the surface
WP2 net: mesh 200µm (UNESCO 1968)
L4
samples are stored in 5% formalin
taxonomic identification
zooplankton database
latitude: 50.67°N
longitude: 4.58°W
data analysis
start: 1988
sample frequency: weekly
abundance: 1988- on going
biomass: 1993-1998
copepods eggs production: 1992-2005
Composition of the “Top20” dominant species at L4 (Plymouth) 19882006
Sagitta sp.
90%
Array of autonomous moorings
• An observatory needs to directly observe something;
• Need real-time data (rather than just RS / modelling);
• Capital bid successful: currently specifications out to tender …
• Have permissions for moorings at L4 and E1.
PML:(base node)
Met. Station; Aerosols;
L4:Moored profiling buoy
CTDf, Optics, Nutrients …
expandable for visitors?
E1:Moored (profiling?) buoy
CTDf, Optics, Nutrients …
Rame Head:(shore node)
Met. Station; Aerosols;
Remote Observatory
Remote Sensing
frontal region
frontal region
Tidal
mixing
Autumn bloom
case I
stratified
•
•
SST (1981 - ) and ocean colour (1997 - ) to provide synoptic
overview of WCO domain.
Delivered via web and Web Map Server technology.
case II
26 Aug - 01 Sep
16-22 Sep
AVHRR
SST
02-08 Sep
9-15 Sep
23-29 Sep
NRT data provided in
partnership with
NEODAAS PML.
MODIS
chlorophyll-a
26 Aug - 01 Sep
9-15 Sep
02-08 Sep
16-22 Sep
23-29 Sep
NRT data provided in
partnership with
NEODAAS PML.
Virtual Observatory
Western English Channel Model
7km Western Channel POLCOMS-ERSEM
PML-delayed 7 day Hindcast 2002-pres
2km under-development, 500m regional submodel in vicinity of L4/E1 proposed
Marine System Model: ERSEM
Ecosystem
Forcing
Atmosphere
Cloud Cover
Wind Stress
O2
CO2
DMS
Irradiation
Heat
Flux
Physics
Pico-f
Phytoplankton
Coccoliths
Flagell
-ates
Si
NO3
Diatoms
Particulates
DIC
NH4
Bacteria
PO4
Rivers and boundaries
0D
UK
MO
Dissolved
1D
Heterotrophs
Micro-
Meso-
Consumers
Suspension
Feeders
3D
GOTM
POLCOMS
D
e
t
r
i
t
u
s
Oxygenated
Layer
Aerobic
Bacteria
Meiobenthos
Anaerobic
Bacteria
Deposit
Feeders
Redox
Discontinuity
Layer
Reduced
Layer
N
u
t
r
I
e
n
t
s
N
u
t
r
i
e
n
t
s
Development of Model Metrics
Validation and verification
Relationships between model and data
(adapted from the ideas of Dan Lynch)
Data
x
FN
x
Predictive
x
Error x
x
x
t1
x
Predictionx
x
TN
x
x
x
Observational
Error
Truth
x
T
x
x
x
TP
x
x
xP
O
x
FP
Predictive
t1
uncertainty
(e.g. numerical error,
parameter uncertainty)
Dsicrimination
Analysis
Observation
Residual
f(O-P)
Model
Data assimilation is
the art of reducing
this distance
Observational
accuracy,
Taylor
(e.g.Diagram
measurement
error, range of
replicates etc.)
How well does ERSEM capture the seasonal
succession at L4?
7
6
Multivariate Validation: Comparison of PC1 for modelled
and observed
phytoplankton
Dinoflagellates
Assessing short term forecast skill
Like with Like comparison
S (surface)
20
5
4
3
2
-20
PC1
σD/σM
0
-40
Log Chlorophyll
-60
Monthly Mean Chlorophyll
Chlorophyll
1
0
-80
S (dmean)
Flagellates
Silicate
Diatoms
Bacteria
-100
Picophytoplankton
0
100 0.3200
0
0.1
0.2
Phosphate
Nitrate
T (dmean)
T(surface)
0.4
300 0.5 4000.6
Day 2003-04
r2
500
0.7
600
0.8
L4
700
0.9
Model
1
Data Delivery
Hosting of Ecosystem parameters (NCOF box)
Summary
If the model predicts a bloom what’s the probability it is correct?
PPV 
CP
CP  IP
Positive Predictive Value
A. PPV for threshold > mean chlorophyll, B. PPV for threshold > 1.5 mean chlorophyll for that
pixel,
Allen et al Harmful Algae (in press)